Evolution of Regulatory Systems in Bacteria (Invited Keynote Talk) | p. 1 |
Integrating Multiple-Platform Expression Data through Gene Set Features | p. 5 |
Practical Quality Assessment of Microarray Data by Simulation of Differential Gene Expression | p. 18 |
Mean Square Residue Biclustering with Missing Data and Row Inversions | p. 28 |
Using Gene Expression Modeling to Determine Biological Relevance of Putative Regulatory Networks | p. 40 |
Querying Protein-Protein Interaction Networks | p. 52 |
Integrative Approach for Combining TNF ¿-NF ¿B Mathematical Model to a Protein Interaction Connectivity Map | p. 63 |
Hierarchical Organization of Functional Modules in Weighted Protein Interaction Networks Using Clustering Coefficient | p. 75 |
Bioinformatics Challenges in Translational Research (Invited Keynote Talk) | p. 87 |
Untangling Tanglegrams: Comparing Trees by Their Drawings | p. 88 |
An Experimental Analysis of Consensus Tree Algorithms for Large-Scale Tree Collections | p. 100 |
Counting Faces in Split Networks | p. 112 |
Relationship between Amino Acids Sequences and Protein Structures: Folding Patterns and Sequence Patterns | p. 124 |
Improved Algorithms for Parsing ESLTAGs: A Grammatical Model Suitable for RNA Pseudoknots | p. 135 |
Efficient Algorithms for Self Assembling Triangular and Other Nano Structures | p. 148 |
Motif Construction from High-Throughput SELEX Data (Invited Keynote Talk) | p. 159 |
Rearrangement Phylogeny of Genomes in Contig Form | p. 160 |
Prediction of Contiguous Regions in the Amniote Ancestral Genome | p. 173 |
Pure Parsimony Xor Haplotyping | p. 186 |
A Decomposition of the Pure Parsimony Haplotyping Problem | p. 198 |
Exact Computation of Coalescent Likelihood under the Infinite Sites Model | p. 209 |
Imputation-Based Local Ancestry Inference in Admixed Populations | p. 221 |
Interpreting Population Sequencing Data (Invited Keynote Talk) | p. 234 |
Modeling and Visualizing Heterogeneity of Spatial Patterns of Protein-DNA Interaction from High-Density Chromatin Precipitation Mapping Data | p. 236 |
A Linear-Time Algorithm for Analyzing Array CGH Data Using Log Ratio Triangulation | p. 248 |
Mining of cis-Regulatory Motifs Associated with Tissue-Specific Alternative Splicing | p. 260 |
Analysis of Cis-Regulatory Motifs in Cassette Exons by Incorporating Exon Skipping Rates | p. 272 |
A Class of Evolution-Based Kernels for Protein Homology Analysis: A Generalization of the PAM Model | p. 284 |
Irreplaceable Amino Acids and Reduced Alphabets in Short-Term and Directed Protein Evolution | p. 297 |
A One-Class Classification Approach for Protein Sequences and Structures | p. 310 |
Prediction and Classification of Real and Pseudo MicroRNA Precursors via Data Fuzzification and Fuzzy Decision Trees | p. 323 |
Author Index | p. 335 |
Table of Contents provided by Ingram. All Rights Reserved. |
The New copy of this book will include any supplemental materials advertised. Please check the title of the book to determine if it should include any access cards, study guides, lab manuals, CDs, etc.
The Used, Rental and eBook copies of this book are not guaranteed to include any supplemental materials. Typically, only the book itself is included. This is true even if the title states it includes any access cards, study guides, lab manuals, CDs, etc.