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| Accelerating the Rate of Genome Mapping and Sequencing: Will Computational Biology Keep Up? | p. 3 |
| Genome Informatics: Requirements and Challenges | p. 17 |
| Linguistic Approaches to Understanding the Meaning of DNA | p. 33 |
| Reasoning about Biochemical Compounds and Processes | p. 35 |
| GenEng: A Dialogue-Based Natural Language Interface to the GenBank | p. 51 |
| DNA Statistics, Overlapping Word Paradox and Conway Equation | p. 61 |
| Plausible Classification Codes and Local Compositional Complexity of Nucleotide Sequences | p. 69 |
| A Syntactic Pattern Recognition System for DNA Sequences | p. 89 |
| DNA as a Language | p. 103 |
| Analysis of Expressed Sequence Tags from Human Brain cDNAs | p. 113 |
| SBH and the Integration of Complementary Approaches in the Mapping, Sequencing and Understanding of Complex Genomes | p. 121 |
| Physical Mapping of the Human Genome: Computational Aspects | p. 135 |
| CPROP: A Rule-Based Program for Constructing Genetic Maps | p. 149 |
| Clone Ordering by Simulated Annealing: Application to the STS-Content Map of Chromosome 21 | p. 169 |
| Models and Analyses of Genomic Evolution | p. 177 |
| Pulsed Field Gel Electrophoresis Simulations in the Diffusive Regime | p. 185 |
| Multiplex Genomic Walking: Integration of the Wet Lab and Computer Lab into a Single Prototyping Environment | p. 197 |
| Data Management for Re-Sequencing DNA | p. 207 |
| Physical Mapping of Genomes Using the Landmark Strategy | p. 219 |
| Prediction of Gene Locations Using DNA Markov Chain Models | p. 231 |
| Massively Parallel Processing on the INTEL Paragon System: One Tool in Achieving the Goals of the Human Genome Project | p. 249 |
| ODS: Overlapping Oligonucleotide Database with Deductive Engine for Signal Sequence Search | p. 263 |
| A Genetic Algorithm for Assembling Chromosome Physical Maps | p. 273 |
| A Graphical Environment for a Computerized Metabolic Map | p. 287 |
| Comparative Analysis of Genomic Data: A Global Look at Structural and Regulatory Features | p. 297 |
| An Object-Oriented Knowledge Base Management Technology for Supporting Scientific Research and Applications | p. 309 |
| Application of Neural Networks to the Analysis of Structure and Function in Biologically Active Macromolecules | p. 331 |
| Protein Classification Artificial Neural System: A Filter Program for Database Search | p. 349 |
| Use of the Backpropagation Neural Network Algorithm for Prediction of Protein Folding Patterns | p. 359 |
| Using Knowledge-Based Neural Networks to Refine Existing Biological Theories | p. 377 |
| Characterizing and Learning of Protein Conformations | p. 391 |
| Homologous Gene Family Database Compilation | p. 403 |
| A Method for Joining Contigs in Automatic DNA Sequencing | p. 413 |
| Multiple Sequence Alignment Based on New Approaches of Tree Construction and Sequence Comparison | p. 419 |
| Identification of Genes in Genomic and EST Sequences | p. 429 |
| Pocket Arithmetic and Needleman-Wunsch on Cray Research Computers | p. 435 |
| Patterns of Oligonucleotide Distribution within DNA and RNA Functional Sites | p. 445 |
| Gene Recognition and Assembly in the GRAIL System: Progress and Challenges | p. 465 |
| Identification of singular domains on cDNA sequences by Kohonen's Features Maps | p. 479 |
| A Linguistic Integration of a Biological Database | p. 487 |
| A New Agarose Gel Model | p. 501 |
| Use of a Visual Comparative Method to Resolve Conserved Sequence Motifs in Proteins | p. 505 |
| SORFIND: A Computer Program That Predicts Exons in Vertebrate Genomic DNA | p. 513 |
| Computer Analysis and Recognition of Functional Sites via Oligonucleotide Pattern Distributions | p. 521 |
| GenelD - A Computer Server for Prediction of Genes in DNA Sequences | p. 545 |
| Simulations of Ordering and Sequence Reconstruction of Random DNA Clones Hybridized with a Small Number of Oligomeric Probes | p. 555 |
| Exhaustive Search of Homologous Regions Between Two Large DNA Sequences Using an Entropy Measure | p. 567 |
| Genviewer: A Computing Tool for Protein-Coding Regions Prediction in Nucleotide Sequences | p. 573 |
| Distribution of Informative Binary Codes in Mammalian DNA | p. 589 |
| A Hypertext Bibliography on Genetic Sequence Analysis | p. 597 |
| Application of Fractal Representation of Genetic Texts for Recognition of Genome Functional and Coding Regions | p. 609 |
| The Effects of Nucleotide Substitution on Amino Acid Substitution | p. 623 |
| Fractal Dimensions of Oligonucleotide Compositions of DNA Sequences | p. 635 |
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