Preface to the second edition | |
Acknowledgements | |
What is genetic variation? | |
Deoxyribose nucleic acid | |
Ribose nucleic acid | |
What is the genetic code? | |
Protein structure | |
So what about chromosomes? | |
How does sexual reproduction produce variation? | |
Mitochondrial and chloroplast DNA | |
How can genetic variation be measured? | |
DNA sequence variation | |
DNA fragment size variation | |
Protein variation | |
Phenotypic variation | |
Genetic structure in natural populations | |
What is a population? | |
How are allele frequencies estimated? | |
What is the relationship between alleles and genotypes? | |
How do allele frequencies change over time? | |
How does population structure arise? | |
How are genetic markers used to study population structure? | |
Levels of genetic differentiation in aquatic organisms | |
Potential problems with allozymes and coding markers | |
mtDNA variation | |
Microsatellite variation | |
Population structure in the flat oyster | |
Mixed stock analysis (MSA) | |
Genetics of population size in conservation and aquaculture | |
Genetics of small population size in the wild | |
Genetic markers in conservation | |
Genetics of small population size in the hatchery | |
Is there evidence of loss of genetic variation in the hatchery? | |
How does hatchery propagation affect heterozygosity? | |
Genetic markers for identification of hatchery product | |
Genetic markers for pathogen identification | |
Genetic variation of traits | |
Qualitative traits | |
Quantitative traits | |
What kinds of traits are important? | |
Variation of a quantitative trait | |
How can we estimate narrow-sense heritability? | |
Realised heritability | |
Correlated traits | |
What types of artificial selections are there? | |
Setting up a breeding programme | |
Inbreeding, cross-breeding and hybridisation | |
Current status of selective breeding programmes in aquaculture | |
From genetics to genomics | |
What is the genome? | |
Genome mapping | |
Whole genome sequencing: the 'big picture' | |
QTL mapping | |
Application of QTLs in aquaculture and fisheries management | |
Marker-assisted selection (MAS): from QTLs to genomic selection | |
Transcriptomics | |
Triploids and beyond: why manipulate ploidy? | |
How is it done? | |
Production of gynogens and androgens | |
Identification of ploidy change | |
Value of Triploids | |
Tetraploids | |
Gynogens and androgens | |
Genetic engineering in aquaculture | |
The DNA construct | |
Transgene delivery | |
Transgene integration | |
Detecting integration and expression of the transgene | |
Results of transgenesis efforts in fish | |
So much for transgenics - what about cloning? | |
Genethics | |
Glossary | |
Index | |
Colour plates | |
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